---
id: "claim:assessing-the-multimodal-tradeoff-2023-04-18-biorxiv:db2e3863ce2cd0a4b1bf"
kind: "claim"
title: "Cell Ranger-generated peaks and transcriptome references were used with snATAK to assess quantification concordance."
description: ""
url: "https://sina.bio/claim/cell-ranger-generated-peaks-and-transcriptome-references-were-used-with-0c0c6fc3"
---

# Cell Ranger-generated peaks and transcriptome references were used with snATAK to assess quantification concordance.

## Content

Cell Ranger-generated peaks and transcriptome references were used with snATAK to assess quantification concordance.

## Metadata

```json
{
  "claim_position": 177,
  "source_publication_id": "version:assessing-the-multimodal-tradeoff--2023-04-18-biorxiv",
  "source_work_id": "work:assessing-the-multimodal-tradeoff"
}
```

## Connections (1)

### Assessing the multimodal tradeoff

- ID: `version:assessing-the-multimodal-tradeoff--2023-04-18-biorxiv`
- Kind: `publication`
- Direction: `incoming`
- URL: <https://sina.bio/publication/assessing-the-multimodal-tradeoff>

This publication contains this grounded claim.

> We ran Cell Ranger Arc on the 10x Multiome X 10k PBMC dataset and used the peaks and transcriptome reference generated by Cell Ranger with snATAK to assess quantification concordance.

Source: 2023-04-18-biorxiv.pdf — <https://sina.bio/source/2023-04-18-biorxiv-pdf>