---
id: "claim:kallisto-bustools-and-kb-python-for-quantifying-bulk-single-cell-and-single-nuc-d2d227835f:4f4caf4eab0a26e1feb3"
kind: "claim"
title: "kb count output JSON files contain quality-control metrics such as the fraction of reads pseudoaligned."
description: ""
url: "https://sina.bio/claim/kb-count-output-json-files-contain-quality-control-metrics-such-as-the-93311171"
---

# kb count output JSON files contain quality-control metrics such as the fraction of reads pseudoaligned.

## Content

kb count output JSON files contain quality-control metrics such as the fraction of reads pseudoaligned.

## Metadata

```json
{
  "claim_position": 119,
  "source_publication_id": "version:kallisto-bustools-and-kb-python-for-quantifying-bulk-single-cell-and-single-nucleus-rna-seq--2023-11-22-biorxiv",
  "source_work_id": "work:kallisto-bustools-and-kb-python-for-quantifying-bulk-single-cell-and-single-nucleus-rna-seq"
}
```

## Connections (1)

### kallisto, bustools and kb-python for quantifying bulk, single-cell and single-nucleus RNA-seq

- ID: `version:kallisto-bustools-and-kb-python-for-quantifying-bulk-single-cell-and-single-nucleus-rna-seq--2023-11-22-biorxiv`
- Kind: `publication`
- Direction: `incoming`
- URL: <https://sina.bio/publication/kallisto-bustools-and-kb-python-for-quantifying-bulk-single-cell-and-si-70b58d03>

This publication contains this grounded claim.

> The output directory of a kb count run contains multiple JSON67 files that contain quality control values such as the percentage of reads pseudoaligned.

Source: 2023-11-22-biorxiv.pdf — <https://sina.bio/source/2023-11-22-biorxiv-pdf>