---
id: "claim:long-read-sequencing-transcriptome-quantification-with-lr-kallisto-2025-12-01-p-c105976de1:557c9bcd52f05f8dfcde"
kind: "claim"
title: "Bambu, IsoQuant, lr-kallisto, and Oarfish had high replicate CCCs for isoform variability."
description: ""
url: "https://sina.bio/claim/bambu-isoquant-lr-kallisto-and-oarfish-had-high-replicate-cccs-for-isof-c501b373"
---

# Bambu, IsoQuant, lr-kallisto, and Oarfish had high replicate CCCs for isoform variability.

## Content

Bambu, IsoQuant, lr-kallisto, and Oarfish had high replicate CCCs for isoform variability.

## Metadata

```json
{
  "claim_position": 108,
  "source_publication_id": "version:long-read-sequencing-transcriptome-quantification-with-lr-kallisto--2025-12-01-plos-computational-biology",
  "source_work_id": "work:long-read-sequencing-transcriptome-quantification-with-lr-kallisto"
}
```

## Connections (2)

### Long-read sequencing transcriptome quantification with lr-kallisto

- ID: `version:long-read-sequencing-transcriptome-quantification-with-lr-kallisto--2025-12-01-plos-computational-biology`
- Kind: `publication`
- Direction: `incoming`
- URL: <https://sina.bio/publication/long-read-sequencing-transcriptome-quantification-with-lr-kallisto-3ccc217c>

This publication contains this grounded claim.

> We found that Bambu, IsoQuant, lr-kallisto, and Oarfish all achieved reasonably high CCCs between replicates, both with respect to abundance estimates (Fig 2A), and variability between isoforms (Fig 2B).

Source: 2025-12-01-plos-computational-biology.pdf — <https://sina.bio/source/2025-12-01-plos-computational-biology-pdf>

### lr-kallisto performs as well as other programs on LRGASP stability and robustness measures, with replicate variability e

- ID: `result:long-read-sequencing-transcriptome-quantification-with-lr-kallisto-2025-12-01-p-c105976de1:59d0c285de3173dfa53d`
- Kind: `result`
- Direction: `incoming`
- URL: <https://sina.bio/result/lr-kallisto-performs-as-well-as-other-programs-on-lrgasp-stability-and-0c8c0bf8>

This claim supports this result.