---
id: "claim:quantifying-orthogonal-barcodes-for-sequence-census-assays-2024-01-05-bioinform-db2d59bea4:908eafb6171ae5060452"
kind: "claim"
title: "kallisto and bustools quantify data against the mismatch index."
description: ""
url: "https://sina.bio/claim/kallisto-and-bustools-quantify-data-against-the-mismatch-index-4405bdb7"
---

# kallisto and bustools quantify data against the mismatch index.

## Content

kallisto and bustools quantify data against the mismatch index.

## Metadata

```json
{
  "claim_position": 21,
  "source_publication_id": "version:quantifying-orthogonal-barcodes-for-sequence-census-assays--2024-01-05-bioinformatics-advances",
  "source_work_id": "work:quantifying-orthogonal-barcodes-for-sequence-census-assays"
}
```

## Connections (1)

### Quantifying orthogonal barcodes for sequence census assays

- ID: `version:quantifying-orthogonal-barcodes-for-sequence-census-assays--2024-01-05-bioinformatics-advances`
- Kind: `publication`
- Direction: `incoming`
- URL: <https://sina.bio/publication/quantifying-orthogonal-barcodes-for-sequence-census-assays-f4f3e077>

This publication contains this grounded claim.

> Finally, the kallisto j bustools
> pipeline is used to quantify the dataset using the "mismatch
> index" generated after running "kallisto index" on the mis
> matched FASTA file.

Source: 2024-01-05-bioinformatics-advances.pdf — <https://sina.bio/source/2024-01-05-bioinformatics-advances-pdf>