---
id: "claim:the-impact-of-package-selection-and-versioning-on-single-cell-rna-seq-analysis-0908ab8e75:f0a3f36e669d8c305a31"
kind: "claim"
title: "Cluster similarity used alluvial plots and adjusted Rand index."
description: ""
url: "https://sina.bio/claim/cluster-similarity-used-alluvial-plots-and-adjusted-rand-index-7a10bd9c"
---

# Cluster similarity used alluvial plots and adjusted Rand index.

## Content

Cluster similarity used alluvial plots and adjusted Rand index.

## Metadata

```json
{
  "claim_position": 94,
  "source_publication_id": "version:the-impact-of-package-selection-and-versioning-on-single-cell-rna-seq-analysis--2024-04-05-biorxiv",
  "source_work_id": "work:the-impact-of-package-selection-and-versioning-on-single-cell-rna-seq-analysis"
}
```

## Connections (2)

### Model-Based Clustering, Classification, and Density Estimation Using mclust in R

- ID: `publication:doi:10.1201/9781003277965`
- Kind: `publication`
- Direction: `outgoing`
- URL: <https://sina.bio/publication/model-based-clustering-classification-and-density-estimation-using-mclust-in-r>

This publication is cited in support of this claim.

> Assessment of cluster similarity was assessed visually with alluvial plots generated with the ggalluvial package48 , and with the ARI calculated with the mclust package49 .

Source: 2024-04-05-biorxiv.pdf — <https://sina.bio/source/2024-04-05-biorxiv-pdf>

### The impact of package selection and versioning on single-cell RNA-seq analysis

- ID: `version:the-impact-of-package-selection-and-versioning-on-single-cell-rna-seq-analysis--2024-04-05-biorxiv`
- Kind: `publication`
- Direction: `incoming`
- URL: <https://sina.bio/publication/the-impact-of-package-selection-and-versioning-on-single-cell-rna-seq-a-2f1f0595>

This publication contains this grounded claim.

> Assessment of cluster similarity was assessed visually with alluvial plots

Source: 2024-04-05-biorxiv.pdf — <https://sina.bio/source/2024-04-05-biorxiv-pdf>

> and with the ARI

Source: 2024-04-05-biorxiv.pdf — <https://sina.bio/source/2024-04-05-biorxiv-pdf>